功能基因组学前沿技术和精准医学 (胡宇慧)MED50342023秋 2023春  
2023秋 2023春
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选课类别:专业任务 教学语言:英文
课程类别:专业选修课 开课单位:医学院
课程层次:研究生 获得学分:3.0
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课程简介(教工部数据)
进入后基因组时代,功能基因组学的飞速发展已发明了多种尖端的组学工具,可以系统生物学层面开展人类疾病产生和治疗过程的研究,并同时揭示个体患者之间的巨大差异。尽管机遇与挑战并存,但实现个性化医疗(即精准医疗)(PM)的重要性已得到广泛认可。本课程旨在提供 PM领域中的两个重要组成模块/部分:功能基因组学中的组学工具,及其在PM(聚焦药物基因组学)中的应用。模块1“功能基因组学、系统生物学和组学技术”涵盖人类基因组的基本概念和范围、功能基因组学(从基因组到转录组、蛋白质组和代谢组)中的关键分子和术语;相应组学工具的历史、概念、技术和应用,包括用于基因组/转录组等分析的第二代和第三代DNA高通量测序,以及蛋白质组学和代谢组学技术;还涵盖了单细胞技术的最新发展,包括空间位置解析的单细胞技术;在简要介绍数据分析工具的基础上,重点讲授每个组学工具获得结果的解释和理解。模块 2“精准医学 (PM) 和组学”涵盖了 PM 的基本概念、研究目标和方法,并聚焦药物基因组学领域,重点讲授对不同个体患者对药物敏感性和药物代谢至关重要的遗传/基因组、和非遗传变异和多态。模块 1 中介绍的关键组学工具和分析方法同样适用于药物基因组学研究,并进行应用场景/特点的讲解。此外,本课程还讲授临床组学工具使用和药物基因组数据管理涉及的医学伦理。通过本课程学习,学生将熟练掌握功能基因组学的基本概念和知识,以及转录组学/蛋白质组学/代谢组学水平的相关尖端组学工具,并掌握如何用于研究导致疾病发展和治疗反应个体差异的遗传/非遗传性变异。此外,学生可掌握药物基因组学和精准医学的现状、前景、机遇和挑战、伦理等方面的知识,并发表自己的见解。


Entering the post-genome era, the rapid advancement in functional genomics have invented multiple cutting-edge omics tools to investigate the human diseases and the therapeutic processes in a systematic way meanwhile disclosing dramatic variations among individual patients. The importance of fulfilling personalized medicine, also namely Precision Medicine (PM), has been widely recognized, albeit possessing both opportunities and challenges.This course aims to deliver two main modules/parts in PM: the omics tools in functional genomics, and their applications in PM with the focus on Pharmacogenomics. Module-1 “Functional genomics, systems biology, and omics technologies” covers the basic concept and scopes of human genome, key molecular terminologies in functional genomics (from genome to transcriptome, proteome, and metabolome); the history, concept, technique, and applications of cutting-edge omics tools including next-generation sequencing (2nd & 3rd generation) for genome/transcriptome analyses, as well as technologies in proteomics and metabolomics. The most recent development on single-cell technologies, including spatially resolved single-cell technologies are also be covered. The analytic tools are briefly introduced with the focuses on the result interpretation and analyses of each omics tool.Module-2 “Precision Medicine (PM) and Omics” covers the basic concept, goals, and approaches of PM with particular focus on Pharmacogenomics, which discovers genetic/genomic and non-genetic variations critical to drug sensitivity and metabolism for individual patient. The key omics tools and analytical methods introduced in Module-1 are also discussed for pharmacogenomic studies. Moreover, the ethics to use omics tools and management of pharmacogenomic data are also discussed in the course. Within this course, the students are expected to get familiar to basic concepts and knowledge in functional genomics and relevant cutting-edge omics tools at transcriptomic/proteomic/metabolomic level to study genetic/non-genetics variations responsible for disease development and therapeutic responses. Through the course learning, the students are expected to grasp the knowledge on the status, perspective, opportunities and challenges, as well as ethics of pharmacogenomics and precision medicine, and also to deliver their own opinions. 
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